PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_158850g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 298aa    MW: 31305.3 Da    PI: 6.4242
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_158850g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-06271296530
                     HHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   5 hnerErrRRdriNsafeeLrellPka 30 
                     h+++Er RR+ri +++  L+el+P++
  MA_158850g0010 271 HSIAERLRRERIAERMKSLQELVPNS 296
                     99**********************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.04E-6264297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.471266298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.11E-4270298No hitNo description
Gene3DG3DSA:4.10.280.107.3E-6271296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MDDFLDQILS SSSSWMDMSG GQATGMSGDS MGPFQETLKH PTIPSDTLHR LVESNTVAGG  60
PTSLQLNTSV PVTRQGSTSQ FLTAVGGPSR TAVSLAELAS AGSSSSEASG FQQALADSHP  120
PAPVWSESYT VTSALPAAVG QGKIEGFTLK EETVQGDGHL LGKRSHSEDK MLARENRSGD  180
TEHDDLQGTL LTSYTGPQGG QTVLPRTPGS QSHQQNLSTQ TIQSGEGTSL QQYGNHSAVS  240
QLQSGAGGGN AANGAARPRV RARRGQATDP HSIAERLRRE RIAERMKSLQ ELVPNSNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1275280RLRRER
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1006860.0BT100686.1 Picea glauca clone GQ00411_C12 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5816313